Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.79■□□□□ 0.12
RB1P06400 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.79■□□□□ 0.12
RB1P06400 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 KRT18P9-201ENST00000604826 1300 ntBASIC15.79■□□□□ 0.12
RB1P06400 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RB1P06400 AL512430.1-201ENST00000392575 860 ntBASIC15.79■□□□□ 0.12
RB1P06400 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 IGHV3-37-201ENST00000518544 340 ntBASIC15.79■□□□□ 0.12
RB1P06400 AC093752.3-201ENST00000567343 901 ntBASIC15.79■□□□□ 0.12
RB1P06400 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RB1P06400 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.79■□□□□ 0.12
RB1P06400 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RB1P06400 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.79■□□□□ 0.12
RB1P06400 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.79■□□□□ 0.12
RB1P06400 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 DOC2GP-204ENST00000639052 2548 ntBASIC15.78■□□□□ 0.12
RB1P06400 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 AC097065.1-201ENST00000425737 517 ntBASIC15.78■□□□□ 0.12
RB1P06400 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 AL645933.1-201ENST00000440087 609 ntBASIC15.78■□□□□ 0.12
RB1P06400 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RB1P06400 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.78■□□□□ 0.12
RB1P06400 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.78■□□□□ 0.12
RB1P06400 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 AC087392.5-201ENST00000612517 489 ntBASIC15.78■□□□□ 0.12
RB1P06400 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.78■□□□□ 0.12
RB1P06400 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RB1P06400 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.78■□□□□ 0.12
RB1P06400 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.77■□□□□ 0.12
RB1P06400 CICP11-201ENST00000434745 2827 ntBASIC15.77■□□□□ 0.12
RB1P06400 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RB1P06400 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RB1P06400 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RB1P06400 PCDH8P1-201ENST00000428983 2773 ntBASIC15.77■□□□□ 0.12
RB1P06400 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.77■□□□□ 0.12
RB1P06400 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RB1P06400 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RB1P06400 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RB1P06400 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RB1P06400 AL583805.1-201ENST00000391389 531 ntBASIC15.77■□□□□ 0.12
RB1P06400 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms