Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGN1P05114 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGN1P05114 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGN1P05114 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.74□□□□□ -0.21
HMGN1P05114 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGN1P05114 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HMGN1P05114 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
HMGN1P05114 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HMGN1P05114 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HMGN1P05114 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 DMBT1P1-203ENST00000636837 4628 ntBASIC13.73□□□□□ -0.21
HMGN1P05114 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HMGN1P05114 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.73□□□□□ -0.21
HMGN1P05114 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGN1P05114 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.73□□□□□ -0.21
HMGN1P05114 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 HLA-V-204ENST00000476601 1289 ntBASIC13.73□□□□□ -0.21
HMGN1P05114 RN7SL618P-201ENST00000477850 296 ntBASIC13.73□□□□□ -0.21
HMGN1P05114 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.73□□□□□ -0.21
HMGN1P05114 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.73□□□□□ -0.21
HMGN1P05114 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HMGN1P05114 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGN1P05114 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.73□□□□□ -0.21
HMGN1P05114 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HMGN1P05114 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGN1P05114 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGN1P05114 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGN1P05114 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 AL031595.1-201ENST00000623969 4709 ntBASIC13.73□□□□□ -0.21
HMGN1P05114 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGN1P05114 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HMGN1P05114 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 AC005840.4-201ENST00000541242 2494 ntBASIC13.72□□□□□ -0.21
HMGN1P05114 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 AL928921.2-201ENST00000641325 2442 ntBASIC13.72□□□□□ -0.21
HMGN1P05114 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGN1P05114 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms