Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
APOEP02649 REXO1L4P-201ENST00000605109 1937 ntBASIC15.86■□□□□ 0.13
APOEP02649 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
APOEP02649 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 ACTBP8-201ENST00000403258 1108 ntBASIC15.86■□□□□ 0.13
APOEP02649 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.86■□□□□ 0.13
APOEP02649 U91328.1-201ENST00000437528 223 ntBASIC15.86■□□□□ 0.13
APOEP02649 AC234783.1-201ENST00000441761 496 ntBASIC15.86■□□□□ 0.13
APOEP02649 BCRP2-202ENST00000447763 634 ntBASIC15.86■□□□□ 0.13
APOEP02649 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.86■□□□□ 0.13
APOEP02649 BCRP6-201ENST00000510112 632 ntBASIC15.86■□□□□ 0.13
APOEP02649 BCRP7-201ENST00000511549 544 ntBASIC15.86■□□□□ 0.13
APOEP02649 KRT17P8-201ENST00000540749 863 ntBASIC15.86■□□□□ 0.13
APOEP02649 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.86■□□□□ 0.13
APOEP02649 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
APOEP02649 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.86■□□□□ 0.13
APOEP02649 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
APOEP02649 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 AC007292.2-201ENST00000593524 1812 ntBASIC15.86■□□□□ 0.13
APOEP02649 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.86■□□□□ 0.13
APOEP02649 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
APOEP02649 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 KRT8P14-201ENST00000414254 1442 ntBASIC15.85■□□□□ 0.13
APOEP02649 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.85■□□□□ 0.13
APOEP02649 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
APOEP02649 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.85■□□□□ 0.13
APOEP02649 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 RAB43P1-201ENST00000561790 589 ntBASIC15.85■□□□□ 0.13
APOEP02649 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 AL009178.2-201ENST00000597278 2719 ntBASIC15.85■□□□□ 0.13
APOEP02649 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
APOEP02649 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.85■□□□□ 0.13
APOEP02649 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
APOEP02649 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms