Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 BEND3P3-201ENST00000611030 2440 ntBASIC12.69□□□□□ -0.38
SIX6O95475 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.68□□□□□ -0.38
SIX6O95475 SCARNA2-201ENST00000458748 420 ntBASIC12.68□□□□□ -0.38
SIX6O95475 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SIX6O95475 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.68□□□□□ -0.38
SIX6O95475 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SIX6O95475 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SIX6O95475 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.67□□□□□ -0.38
SIX6O95475 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.67□□□□□ -0.38
SIX6O95475 AL445209.1-201ENST00000607269 3491 ntBASIC12.67□□□□□ -0.38
SIX6O95475 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SIX6O95475 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SIX6O95475 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 AC098859.1-201ENST00000502915 1238 ntBASIC12.67□□□□□ -0.38
SIX6O95475 FOSL1P1-201ENST00000511041 816 ntBASIC12.67□□□□□ -0.38
SIX6O95475 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.67□□□□□ -0.38
SIX6O95475 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.67□□□□□ -0.38
SIX6O95475 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
SIX6O95475 MIR1199-201ENST00000621445 119 ntBASIC12.67□□□□□ -0.38
SIX6O95475 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms