Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 AL353779.1-201ENST00000434793 351 ntBASIC15.21■□□□□ 0.03
GPC4O75487 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.21■□□□□ 0.03
GPC4O75487 API5-211ENST00000534695 560 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 AL132655.2-201ENST00000596276 594 ntBASIC15.21■□□□□ 0.03
GPC4O75487 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.21■□□□□ 0.03
GPC4O75487 AC004233.3-201ENST00000607794 1269 ntBASIC15.21■□□□□ 0.03
GPC4O75487 AL662799.1-202ENST00000614205 422 ntBASIC15.21■□□□□ 0.03
GPC4O75487 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GPC4O75487 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC4O75487 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GPC4O75487 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
GPC4O75487 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.21■□□□□ 0.02
GPC4O75487 WASH3P-207ENST00000560956 1394 ntBASIC15.21■□□□□ 0.02
GPC4O75487 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GPC4O75487 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
GPC4O75487 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GPC4O75487 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GPC4O75487 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
GPC4O75487 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
GPC4O75487 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
GPC4O75487 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.2■□□□□ 0.02
GPC4O75487 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.2■□□□□ 0.02
GPC4O75487 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.2■□□□□ 0.02
GPC4O75487 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.2■□□□□ 0.02
GPC4O75487 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
GPC4O75487 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.2■□□□□ 0.02
GPC4O75487 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 BRI3BPP1-201ENST00000594224 787 ntBASIC15.2■□□□□ 0.02
GPC4O75487 MIR8072-201ENST00000614241 80 ntBASIC15.2■□□□□ 0.02
GPC4O75487 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
GPC4O75487 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.2■□□□□ 0.02
GPC4O75487 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC4O75487 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.2■□□□□ 0.02
GPC4O75487 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 PEG13-201ENST00000631594 5667 ntBASIC15.19■□□□□ 0.02
GPC4O75487 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 AC015656.1-201ENST00000624209 3578 ntBASIC15.19■□□□□ 0.02
GPC4O75487 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms