Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 TSPY19P-201ENST00000418461 509 ntBASIC11.74□□□□□ -0.53
PDE6DO43924 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 TSPY18P-201ENST00000441642 509 ntBASIC11.74□□□□□ -0.53
PDE6DO43924 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.74□□□□□ -0.53
PDE6DO43924 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.74□□□□□ -0.53
PDE6DO43924 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.74□□□□□ -0.53
PDE6DO43924 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 AC114271.1-201ENST00000612689 2813 ntBASIC11.74□□□□□ -0.53
PDE6DO43924 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.74□□□□□ -0.53
PDE6DO43924 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PDE6DO43924 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.74□□□□□ -0.53
PDE6DO43924 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.73□□□□□ -0.53
PDE6DO43924 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 AZGP1P1-201ENST00000411909 902 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 ATP5G2P1-201ENST00000433580 426 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.73□□□□□ -0.53
PDE6DO43924 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 AC073648.2-201ENST00000510116 352 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.73□□□□□ -0.53
PDE6DO43924 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.73□□□□□ -0.53
PDE6DO43924 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
PDE6DO43924 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.73□□□□□ -0.53
PDE6DO43924 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 REXO1L6P-202ENST00000619970 1078 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 AC020910.6-201ENST00000623084 1459 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 AC007064.4-201ENST00000637740 555 ntBASIC11.73□□□□□ -0.53
PDE6DO43924 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms