Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
UPK2O00526 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UPK2O00526 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 AC055811.4-201ENST00000624039 1754 ntBASIC12.13□□□□□ -0.47
UPK2O00526 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.13□□□□□ -0.47
UPK2O00526 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.13□□□□□ -0.47
UPK2O00526 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.13□□□□□ -0.47
UPK2O00526 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.13□□□□□ -0.47
UPK2O00526 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.13□□□□□ -0.47
UPK2O00526 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 AL512638.1-201ENST00000457493 794 ntBASIC12.13□□□□□ -0.47
UPK2O00526 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.13□□□□□ -0.47
UPK2O00526 TPRX2P-201ENST00000535362 881 ntBASIC12.13□□□□□ -0.47
UPK2O00526 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 AC104794.3-201ENST00000566840 1248 ntBASIC12.13□□□□□ -0.47
UPK2O00526 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.13□□□□□ -0.47
UPK2O00526 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.13□□□□□ -0.47
UPK2O00526 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UPK2O00526 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.13□□□□□ -0.47
UPK2O00526 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.13□□□□□ -0.47
UPK2O00526 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UPK2O00526 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 AL354702.1-201ENST00000442006 1960 ntBASIC12.12□□□□□ -0.47
UPK2O00526 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms