Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC060814.4-201ENST00000594169 2163 ntBASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AL353692.3-201ENST00000407031 1396 ntBASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TCAM1P-207ENST00000485295 1537 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SHROOM2P1-201ENST00000434773 2384 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC063952.2-201ENST00000498792 1227 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 VENTXP5-201ENST00000523979 775 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC022616.7-201ENST00000525383 220 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC011467.4-201ENST00000594891 528 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC131009.4-201ENST00000624048 1740 ntBASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 HERC2P10-201ENST00000570209 2393 ntBASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RN7SL850P-201ENST00000579959 291 ntBASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CYP2A7P1-201ENST00000595391 815 ntBASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms