Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC004899.1-201ENST00000424687 1714 ntBASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 SHC1P1-201ENST00000425230 1745 ntBASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 LILRP1-201ENST00000444199 1370 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 TUBBP5-203ENST00000508529 1334 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AC011742.3-201ENST00000439053 820 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 SPTLC1P5-201ENST00000450718 252 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AC104073.2-201ENST00000453737 312 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RN7SL11P-201ENST00000471305 293 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RNA5SP423-201ENST00000517127 109 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MIR3619-201ENST00000579667 83 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AL162426.1-201ENST00000624141 743 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 AL161772.1-201ENST00000610494 4412 ntBASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.25■□□□□ 0.03
TBC1D3BA6NDS4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 AC092506.1-202ENST00000401022 528 ntBASIC15.24■□□□□ 0.03
TBC1D3BA6NDS4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms