Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.02□□□□□ -0.33
MEIS3P1A6NDR6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MEIS3P1A6NDR6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MEIS3P1A6NDR6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MEIS3P1A6NDR6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 MIR346-201ENST00000362234 95 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 MIR1224-201ENST00000408193 85 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AC243562.1-201ENST00000560672 389 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 RN7SL510P-201ENST00000581311 263 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 MEX3B-202ENST00000558133 4333 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AC055811.4-201ENST00000624039 1754 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AC130686.1-201ENST00000622936 2466 ntBASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MEIS3P1A6NDR6 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AC105206.1-202ENST00000314927 2368 ntBASIC13□□□□□ -0.33
MEIS3P1A6NDR6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SPDYE11-202ENST00000450699 704 ntBASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SPDYE9P-201ENST00000570642 692 ntBASIC13□□□□□ -0.33
MEIS3P1A6NDR6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms