Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 MTDHP5-201ENST00000598980 586 ntBASIC16.48■□□□□ 0.23
CCDC66A2RUB6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 FO393414.2-201ENST00000405153 598 ntBASIC16.47■□□□□ 0.23
CCDC66A2RUB6 HTR5BP-201ENST00000430851 1154 ntBASIC16.47■□□□□ 0.23
CCDC66A2RUB6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 AL031595.1-201ENST00000623969 4709 ntBASIC16.47■□□□□ 0.23
CCDC66A2RUB6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 PEG13-201ENST00000631594 5667 ntBASIC16.47■□□□□ 0.23
CCDC66A2RUB6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC66A2RUB6 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 INTS4P1-203ENST00000641008 3683 ntBASIC16.46■□□□□ 0.23
CCDC66A2RUB6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 AC011474.4-201ENST00000623523 2076 ntBASIC16.46■□□□□ 0.23
CCDC66A2RUB6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 ALG1L8P-201ENST00000533887 760 ntBASIC16.46■□□□□ 0.23
CCDC66A2RUB6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 GPALPP1-207ENST00000611650 899 ntBASIC16.46■□□□□ 0.23
CCDC66A2RUB6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CICP16-201ENST00000502609 2813 ntBASIC16.46■□□□□ 0.23
CCDC66A2RUB6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms