Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 HLA-K-203ENST00000430151 1046 ntBASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 AC004066.1-201ENST00000502488 802 ntBASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 RN7SL828P-201ENST00000607615 303 ntBASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 KRT8P14-201ENST00000414254 1442 ntBASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 MYADML-201ENST00000474610 2147 ntBASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV3S1A0A5B6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.11□□□□□ -0.15
TCRBV3S1A0A5B6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms