Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AL138709.1-201ENST00000614840 1693 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AL603764.1-201ENST00000636452 321 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC108725.1-201ENST00000495472 409 ntBASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AL513477.1-201ENST00000602865 2407 ntBASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI2Q9Y5P3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 KRT43P-201ENST00000434019 910 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 AL355994.2-201ENST00000447882 704 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 RHOQP1-201ENST00000555758 579 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 AC025279.2-201ENST00000569730 653 ntBASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms