Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AC092580.3-201ENST00000430932 139 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AP001160.2-201ENST00000596071 487 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 AL844908.2-201ENST00000609461 460 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AL590560.3-201ENST00000623350 461 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 LINC01230-201ENST00000625222 3017 ntBASIC14.24□□□□□ -0.13
IFT52Q9Y366 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
IFT52Q9Y366 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFT52Q9Y366 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 REXO1L4P-201ENST00000605109 1937 ntBASIC14.23□□□□□ -0.13
IFT52Q9Y366 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 AC241585.1-201ENST00000433527 519 ntBASIC14.23□□□□□ -0.13
IFT52Q9Y366 AC114501.2-201ENST00000439631 535 ntBASIC14.23□□□□□ -0.13
IFT52Q9Y366 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.23□□□□□ -0.13
IFT52Q9Y366 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms