Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AC131206.1-201ENST00000538078 1211 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 ACTG1P22-201ENST00000603793 1099 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AC138466.3-201ENST00000619983 221 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 AL354702.1-201ENST00000442006 1960 ntBASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGC3Q9UN70 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 NORAD-201ENST00000565493 5339 ntBASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 BCRP2-202ENST00000447763 634 ntBASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 BCRP6-201ENST00000510112 632 ntBASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 BCRP7-201ENST00000511549 544 ntBASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGC3Q9UN70 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC3Q9UN70 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms