Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 AC069224.1-201ENST00000566372 1715 ntBASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RIMBP3Q9UFD9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC097474.1-201ENST00000506481 1371 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AL139317.2-201ENST00000556998 158 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 RPS5-205ENST00000598495 800 ntTSL 3 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC009093.10-201ENST00000641956 1442 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC068880.1-201ENST00000507289 2297 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 CRIP1P2-201ENST00000425396 228 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 DUX4L31-201ENST00000446466 1136 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 MIR5193-201ENST00000584510 109 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC239600.1-201ENST00000603201 462 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 AC138627.1-201ENST00000641127 1257 ntBASIC22.9■■□□□ 1.26
RIMBP3Q9UFD9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RIMBP3Q9UFD9 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 KRT18P33-201ENST00000398525 1043 ntBASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RIMBP3Q9UFD9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 AL450346.2-201ENST00000495602 1024 ntBASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 HPX-213ENST00000615166 826 ntTSL 5 BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 AC148476.1-201ENST00000622182 705 ntBASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RIMBP3Q9UFD9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 POP5-201ENST00000341039 913 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 BATF-202ENST00000555504 361 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms