Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 MBLAC2-202ENST00000514906 1936 ntBASIC16.9■□□□□ 0.3
COL20A1Q9P218 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL20A1Q9P218 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.89■□□□□ 0.3
COL20A1Q9P218 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COL20A1Q9P218 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL20A1Q9P218 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC126177.1-201ENST00000547829 2218 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ACTG1P2-201ENST00000415776 1125 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 ACTG1P11-201ENST00000425411 1125 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CHMP4BP1-201ENST00000556017 588 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 AL160314.3-201ENST00000556041 767 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 RN7SL163P-201ENST00000583100 276 ntBASIC16.89■□□□□ 0.29
COL20A1Q9P218 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.89■□□□□ 0.29
COL20A1Q9P218 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL20A1Q9P218 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 PUDPP3-201ENST00000445368 636 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 SNORD3B-2-202ENST00000571722 791 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 RN7SL774P-201ENST00000577467 290 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AC026740.1-201ENST00000607068 791 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 AC090164.2-201ENST00000611487 516 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AC068587.10-201ENST00000641210 219 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.88■□□□□ 0.29
COL20A1Q9P218 AL008718.2-201ENST00000609206 1313 ntBASIC16.88■□□□□ 0.29
COL20A1Q9P218 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms