Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THUMPD1Q9NXG2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THUMPD1Q9NXG2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 BEND3P1-201ENST00000421591 1944 ntBASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 NUS1P3-201ENST00000423502 862 ntBASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 AC092580.3-201ENST00000430932 139 ntBASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 AL158212.4-201ENST00000624062 1286 ntBASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.26□□□□□ -0.13
THUMPD1Q9NXG2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THUMPD1Q9NXG2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms