Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.33■□□□□ 0.53
ECHDC1Q9NTX5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC006001.1-201ENST00000325130 474 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 BOLA2P3-201ENST00000404566 256 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 CD8B2-202ENST00000417670 633 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 RPL7P3-201ENST00000441388 714 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AL391280.1-201ENST00000506969 1062 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC138951.2-201ENST00000623455 1161 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC006453.4-201ENST00000636949 1252 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 AC011840.2-201ENST00000563063 1520 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 INE2-201ENST00000630399 1874 ntBASIC18.33■□□□□ 0.52
ECHDC1Q9NTX5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC1Q9NTX5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 FKBP4P6-201ENST00000457486 1332 ntBASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC234783.1-201ENST00000441761 496 ntBASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AP003171.2-201ENST00000528208 925 ntBASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC106820.3-201ENST00000561653 397 ntBASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms