Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CISHQ9NSE2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CISHQ9NSE2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 MTHFR-210ENST00000641407 2387 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 TPM3P8-201ENST00000330554 643 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 FAM197Y7-201ENST00000432892 766 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 AL590640.2-201ENST00000457038 527 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 RNA5SP486-201ENST00000515961 83 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 KRT17P8-201ENST00000540749 863 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 KRT90P-201ENST00000549264 1064 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 ECM1P1-201ENST00000604092 1279 ntBASIC16.07■□□□□ 0.16
CISHQ9NSE2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CISHQ9NSE2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CISHQ9NSE2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 CNN2P8-201ENST00000421872 913 ntBASIC16.06■□□□□ 0.16
CISHQ9NSE2 AC112492.5-201ENST00000421897 457 ntBASIC16.06■□□□□ 0.16
CISHQ9NSE2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 MESTP3-201ENST00000503460 968 ntBASIC16.06■□□□□ 0.16
CISHQ9NSE2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CISHQ9NSE2 PCDHA3-202ENST00000532566 4594 ntBASIC16.06■□□□□ 0.16
CISHQ9NSE2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.06■□□□□ 0.16
CISHQ9NSE2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms