Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TIMM17BP1-201ENST00000545713 516 ntBASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AC004461.2-201ENST00000629517 803 ntBASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AL157414.3-201ENST00000624276 1954 ntBASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AL354702.1-201ENST00000442006 1960 ntBASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC010327.5-201ENST00000586923 3061 ntBASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC022447.6-201ENST00000515522 438 ntBASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE2Q9NRR3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms