Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 CICP24-201ENST00000605464 2705 ntBASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AL596257.1-201ENST00000641463 2694 ntBASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC006001.1-201ENST00000325130 474 ntBASIC14.16□□□□□ -0.14
LYRM4Q9HD34 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 RPL7P3-201ENST00000441388 714 ntBASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 RHOXF1P1-202ENST00000635473 501 ntBASIC14.16□□□□□ -0.14
LYRM4Q9HD34 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM4Q9HD34 FKBP4P6-201ENST00000457486 1332 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AP000593.2-201ENST00000542775 1433 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 PDIA3P1-201ENST00000471856 1510 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC079776.1-201ENST00000401540 1152 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC112492.5-201ENST00000421897 457 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 FAM8A4P-201ENST00000435433 1213 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AL590640.2-201ENST00000457038 527 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 CROCCP4-201ENST00000457096 498 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 GPR53P-205ENST00000457298 1084 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC079316.1-201ENST00000548397 411 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC106820.3-201ENST00000561653 397 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 AL512343.1-201ENST00000605837 169 ntBASIC14.15□□□□□ -0.14
LYRM4Q9HD34 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYRM4Q9HD34 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms