Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AL645937.2-201ENST00000396808 931 ntBASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC244107.1-201ENST00000442033 332 ntBASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC004890.2-204ENST00000481968 304 ntBASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 AC104794.3-201ENST00000566840 1248 ntBASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 VDAC1P7-201ENST00000462417 847 ntBASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRTM1Q9HBL6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms