Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SP110Q9HB58 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP110Q9HB58 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP110Q9HB58 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP110Q9HB58 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SP110Q9HB58 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SP110Q9HB58 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 TNRC18P2-201ENST00000417666 2714 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.5■□□□□ 0.07
SP110Q9HB58 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SP110Q9HB58 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 USP32P1-208ENST00000506594 1164 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 AC106760.1-201ENST00000508690 800 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 AP001889.1-201ENST00000525414 633 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 SLC25A47P1-201ENST00000531577 414 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 AC233724.13-201ENST00000598383 410 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.5■□□□□ 0.07
SP110Q9HB58 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 AC067750.1-201ENST00000608826 6545 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.5■□□□□ 0.07
SP110Q9HB58 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.5■□□□□ 0.07
SP110Q9HB58 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 AJ011931.1-201ENST00000618749 2492 ntBASIC15.5■□□□□ 0.07
SP110Q9HB58 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SP110Q9HB58 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP110Q9HB58 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SP110Q9HB58 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.49■□□□□ 0.07
SP110Q9HB58 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 EIF3FP3-201ENST00000434851 1086 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 BCRP2-202ENST00000447763 634 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 GAPDHP21-201ENST00000450301 1010 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 BCRP6-201ENST00000510112 632 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 BCRP7-201ENST00000511549 544 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.49■□□□□ 0.07
SP110Q9HB58 AL022328.1-201ENST00000610050 478 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 AC145423.3-201ENST00000615987 467 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 AL035252.4-201ENST00000624174 288 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 AL603764.1-201ENST00000636452 321 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.49■□□□□ 0.07
SP110Q9HB58 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SP110Q9HB58 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 AC018665.1-201ENST00000622927 1362 ntBASIC15.49■□□□□ 0.07
SP110Q9HB58 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP110Q9HB58 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SP110Q9HB58 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SP110Q9HB58 AC103702.1-201ENST00000548801 2630 ntBASIC15.48■□□□□ 0.07
SP110Q9HB58 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SP110Q9HB58 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.48■□□□□ 0.07
SP110Q9HB58 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SP110Q9HB58 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms