Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 SALL4P5-201ENST00000419001 1760 ntBASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 AC015909.3-201ENST00000572855 1794 ntBASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 KRT18P36-201ENST00000411618 1276 ntBASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 SIGLEC18P-201ENST00000602271 909 ntBASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 AC009560.1-201ENST00000620208 434 ntBASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTFDC1Q9BY42 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AC007950.2-201ENST00000615045 2347 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 SSR4P1-203ENST00000599569 2260 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 BANF1P3-201ENST00000412556 261 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 KRT18P66-201ENST00000452970 1269 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AP000358.1-201ENST00000456260 156 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 IGHV3-37-201ENST00000518544 340 ntBASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 AC023024.2-201ENST00000623561 1993 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms