Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ALG1L5P-201ENST00000482043 771 ntBASIC14.75□□□□□ -0.05
EBF4Q9BQW3 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MIR6069-201ENST00000620069 79 ntBASIC14.75□□□□□ -0.05
EBF4Q9BQW3 C20orf181-201ENST00000623918 480 ntBASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 AC105339.1-204ENST00000636249 355 ntBASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AL035456.1-201ENST00000456064 1369 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AC027612.1-201ENST00000445234 2395 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 KRT8P24-201ENST00000560290 1559 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TOMM22P5-201ENST00000416399 439 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AL080243.2-201ENST00000418783 582 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AC093520.2-201ENST00000561830 333 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AL359183.1-201ENST00000623796 2132 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 AL137783.1-201ENST00000623494 1896 ntBASIC14.74□□□□□ -0.05
EBF4Q9BQW3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.73□□□□□ -0.05
EBF4Q9BQW3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms