Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 RN7SL399P-201ENST00000471648 279 ntBASIC14.35□□□□□ -0.11
COL21A1Q96P44 FAM86LP-201ENST00000478302 853 ntBASIC14.35□□□□□ -0.11
COL21A1Q96P44 AC104596.2-201ENST00000512793 793 ntBASIC14.35□□□□□ -0.11
COL21A1Q96P44 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 AC138761.1-201ENST00000584393 385 ntBASIC14.35□□□□□ -0.11
COL21A1Q96P44 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL21A1Q96P44 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COL21A1Q96P44 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
COL21A1Q96P44 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AC093726.1-201ENST00000608064 963 ntBASIC14.34□□□□□ -0.11
COL21A1Q96P44 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.34□□□□□ -0.11
COL21A1Q96P44 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COL21A1Q96P44 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL21A1Q96P44 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL21A1Q96P44 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.33□□□□□ -0.11
COL21A1Q96P44 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL21A1Q96P44 REXO1L4P-201ENST00000605109 1937 ntBASIC14.33□□□□□ -0.11
COL21A1Q96P44 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL21A1Q96P44 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 AC012508.2-201ENST00000567613 1472 ntBASIC14.33□□□□□ -0.12
COL21A1Q96P44 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms