Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDLIM5Q96HC4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 BAATP1-201ENST00000412284 1225 ntBASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 AC012441.1-201ENST00000446669 685 ntBASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 CRB3P1-201ENST00000449338 276 ntBASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 AC138761.1-201ENST00000584393 385 ntBASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PDLIM5Q96HC4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PDLIM5Q96HC4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FO681548.1-201ENST00000455617 1132 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 MESTP3-201ENST00000503460 968 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC131206.1-201ENST00000538078 1211 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC004466.1-201ENST00000599515 1080 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 RPSAP52-203ENST00000622976 1023 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 AC097359.2-201ENST00000604992 2389 ntBASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.7□□□□□ -0.06
PDLIM5Q96HC4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms