Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS33AQ96AX1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 AL157414.3-201ENST00000624276 1954 ntBASIC14.58□□□□□ -0.07
VPS33AQ96AX1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.58□□□□□ -0.07
VPS33AQ96AX1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 TOMM22P5-201ENST00000416399 439 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AP000347.1-202ENST00000435868 847 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 DNAJB3-201ENST00000446806 729 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AC023141.5-201ENST00000458585 616 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AC010327.4-202ENST00000591484 748 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AC152010.1-201ENST00000415779 2006 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 AC015802.1-201ENST00000588104 1449 ntBASIC14.58□□□□□ -0.08
VPS33AQ96AX1 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.57□□□□□ -0.08
VPS33AQ96AX1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 SPDYE7P-202ENST00000420373 878 ntBASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AL512361.1-201ENST00000554200 418 ntBASIC14.57□□□□□ -0.08
VPS33AQ96AX1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 AP001059.3-201ENST00000619053 235 ntBASIC14.57□□□□□ -0.08
VPS33AQ96AX1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms