Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PCDHA3-202ENST00000532566 4594 ntBASIC13.27□□□□□ -0.29
TMEM54Q969K7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 AC113367.3-201ENST00000508316 1912 ntBASIC13.27□□□□□ -0.29
TMEM54Q969K7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 RN7SKP230-201ENST00000365642 335 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 BCRP2-202ENST00000447763 634 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 BCRP6-201ENST00000510112 632 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 BCRP7-201ENST00000511549 544 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 LINC02084-201ENST00000606069 1096 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM54Q969K7 AC138466.3-201ENST00000619983 221 ntBASIC13.26□□□□□ -0.29
TMEM54Q969K7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM54Q969K7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM54Q969K7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM54Q969K7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms