Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDND2Q8NHS1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CSF2RBP1-201ENST00000447905 391 ntBASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 FO681548.1-201ENST00000455617 1132 ntBASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 GAPDHP40-201ENST00000505218 1006 ntBASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC244669.2-201ENST00000612320 853 ntBASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AC005840.4-201ENST00000541242 2494 ntBASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDND2Q8NHS1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 C2orf27AP3-201ENST00000434123 579 ntBASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AP000812.2-201ENST00000538934 718 ntBASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AL354718.3-201ENST00000616414 581 ntBASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 CR382287.1-201ENST00000623954 586 ntBASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 AC091951.1-201ENST00000512854 2465 ntBASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDND2Q8NHS1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms