Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC127383.1-201ENST00000444697 1800 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 TSPY26P-202ENST00000565928 3884 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 GHSR-202ENST00000427970 912 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC104073.2-201ENST00000453737 312 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC100827.2-201ENST00000563214 1194 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AL353770.1-201ENST00000614915 403 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AL136301.1-201ENST00000615830 422 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 MIR7845-201ENST00000618396 99 ntBASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC091046.1-201ENST00000331871 207 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 HLA-K-203ENST00000430151 1046 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC234782.1-201ENST00000451950 919 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC009955.4-201ENST00000597192 544 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC090164.2-201ENST00000611487 516 ntBASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms