Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PPY2P-201ENST00000582808 702 ntBASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 FKBP4P6-201ENST00000457486 1332 ntBASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 LINC00554-201ENST00000564841 3011 ntBASIC15.92■□□□□ 0.14
SCN4BQ8IWT1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 KRT8P4-201ENST00000509735 1454 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 WASH3P-207ENST00000560956 1394 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 BTBD6P1-201ENST00000412176 1267 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 GOLGA2P4-201ENST00000441462 777 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 AC106820.3-201ENST00000561653 397 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 C2orf69P2-201ENST00000562032 1123 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 MIR4525-201ENST00000580000 75 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 RN7SL713P-201ENST00000582127 302 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 EEF1DP1-201ENST00000585891 896 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 MROH4P-201ENST00000431302 1578 ntBASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCN4BQ8IWT1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 MTX1P1-201ENST00000440904 838 ntBASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 MESTP3-201ENST00000503460 968 ntBASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 AC073413.1-201ENST00000603927 732 ntBASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 MIR6869-201ENST00000619434 62 ntBASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCN4BQ8IWT1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms