Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL359258.3-201ENST00000622910 2331 ntBASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 PCDHB19P-201ENST00000570871 2371 ntBASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.72□□□□□ -0.21
RP1L1Q8IWN7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 CEP164P1-201ENST00000455142 418 ntBASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 DNM1P30-201ENST00000563586 452 ntBASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 RPSAP31-201ENST00000416648 895 ntBASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 AC018635.2-201ENST00000608625 364 ntBASIC13.71□□□□□ -0.21
RP1L1Q8IWN7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 AC009090.5-201ENST00000624886 2285 ntBASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
RP1L1Q8IWN7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC006335.1-201ENST00000445200 547 ntBASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RP1L1Q8IWN7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms