Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AL158070.2-201ENST00000623713 1621 ntBASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 RN7SL399P-201ENST00000471648 279 ntBASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PMS2P2-201ENST00000425039 1128 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AC092183.1-201ENST00000469884 875 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AL138799.1-201ENST00000448213 1675 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms