Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 AC007431.3-201ENST00000623221 587 ntBASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 BX539320.1-201ENST00000623759 877 ntBASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST2H3AQ71DI3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC018442.1-201ENST00000421439 2061 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 REXO1L5P-201ENST00000622260 2098 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 MIR661-201ENST00000384842 89 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC098850.1-201ENST00000419919 790 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC123567.1-201ENST00000548294 1261 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AL096865.1-201ENST00000606796 927 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AC232323.1-201ENST00000540724 2099 ntBASIC13.32□□□□□ -0.28
HIST2H3AQ71DI3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC106881.1-201ENST00000605849 3329 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 C1QBPP1-201ENST00000400117 770 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AL139094.1-201ENST00000405549 1188 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC087499.6-201ENST00000411576 835 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms