Protein–RNA interactions for Protein: Q68G74

LHX8, LIM/homeobox protein Lhx8, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX8Q68G74 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX8Q68G74 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LHX8Q68G74 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.57■□□□□ 0.24
LHX8Q68G74 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LHX8Q68G74 RPSAP15-201ENST00000448168 861 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 DUTP3-201ENST00000450025 415 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.57■□□□□ 0.24
LHX8Q68G74 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.57■□□□□ 0.24
LHX8Q68G74 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 MTCYBP27-201ENST00000555160 670 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LHX8Q68G74 MIR3188-201ENST00000583494 85 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 AL035425.4-201ENST00000624509 1063 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
LHX8Q68G74 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 AL603832.2-201ENST00000566195 2125 ntBASIC16.57■□□□□ 0.24
LHX8Q68G74 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LHX8Q68G74 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
LHX8Q68G74 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LHX8Q68G74 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 MTND4P10-201ENST00000446199 1363 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 KRT18P9-201ENST00000604826 1300 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LHX8Q68G74 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 AL807761.2-201ENST00000422849 729 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.56■□□□□ 0.24
LHX8Q68G74 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.56■□□□□ 0.24
LHX8Q68G74 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX8Q68G74 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX8Q68G74 ALG1L6P-201ENST00000515248 758 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX8Q68G74 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LHX8Q68G74 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.56■□□□□ 0.24
LHX8Q68G74 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.56■□□□□ 0.24
LHX8Q68G74 AC087392.5-201ENST00000612517 489 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 AC005618.3-201ENST00000624928 458 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 AC092299.1-201ENST00000632679 757 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 AP001184.1-201ENST00000637936 376 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LHX8Q68G74 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LHX8Q68G74 AD000864.1-201ENST00000624076 2295 ntBASIC16.56■□□□□ 0.24
LHX8Q68G74 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LHX8Q68G74 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX8Q68G74 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LHX8Q68G74 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
LHX8Q68G74 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX8Q68G74 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LHX8Q68G74 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.55■□□□□ 0.24
LHX8Q68G74 HIST2H2BA-201ENST00000412169 381 ntBASIC16.55■□□□□ 0.24
LHX8Q68G74 XBP1P1-201ENST00000436573 652 ntBASIC16.55■□□□□ 0.24
LHX8Q68G74 MTND1P1-201ENST00000445453 368 ntBASIC16.55■□□□□ 0.24
LHX8Q68G74 MTND2P39-201ENST00000457230 764 ntBASIC16.55■□□□□ 0.24
LHX8Q68G74 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX8Q68G74 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.55■□□□□ 0.24
LHX8Q68G74 AL117351.2-201ENST00000513571 157 ntBASIC16.55■□□□□ 0.24
LHX8Q68G74 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms