Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AC093433.1-201ENST00000458048 571 ntBASIC15.89■□□□□ 0.13
RNF43Q68DV7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AL022328.1-201ENST00000610050 478 ntBASIC15.89■□□□□ 0.13
RNF43Q68DV7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AL138799.1-201ENST00000448213 1675 ntBASIC15.89■□□□□ 0.13
RNF43Q68DV7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.89■□□□□ 0.13
RNF43Q68DV7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC104457.1-201ENST00000401024 814 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 GOLGA2P4-201ENST00000441462 777 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 CSF2RBP1-201ENST00000447905 391 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC108725.1-201ENST00000495472 409 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 TDH-203ENST00000531764 1110 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 PTP4A1P2-201ENST00000546033 454 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 PRSS30P-206ENST00000641773 873 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 AC007686.3-201ENST00000619017 3487 ntBASIC15.88■□□□□ 0.13
RNF43Q68DV7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF43Q68DV7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF43Q68DV7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms