Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.63■□□□□ 0.57
RC3H1Q5TC82 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RC3H1Q5TC82 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RC3H1Q5TC82 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RC3H1Q5TC82 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.63■□□□□ 0.57
RC3H1Q5TC82 AC020658.6-201ENST00000623564 1870 ntBASIC18.63■□□□□ 0.57
RC3H1Q5TC82 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AC234644.1-201ENST00000406065 370 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 C2orf69P1-201ENST00000563532 1093 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 MIR3180-2-201ENST00000581748 88 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 AC138466.5-201ENST00000624002 808 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 WASH3P-207ENST00000560956 1394 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 IL9RP3-201ENST00000442856 1674 ntBASIC18.62■□□□□ 0.57
RC3H1Q5TC82 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RC3H1Q5TC82 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 KRT17P5-201ENST00000332088 839 ntBASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.61■□□□□ 0.57
RC3H1Q5TC82 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 ALG1L13P-202ENST00000519320 584 ntBASIC18.61■□□□□ 0.57
RC3H1Q5TC82 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 PRORSD1P-202ENST00000563365 2154 ntBASIC18.61■□□□□ 0.57
RC3H1Q5TC82 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RC3H1Q5TC82 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 LINC02199-201ENST00000506655 2702 ntBASIC18.6■□□□□ 0.57
RC3H1Q5TC82 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 AC126365.1-201ENST00000578585 1514 ntBASIC18.6■□□□□ 0.57
RC3H1Q5TC82 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 BCAS2P2-201ENST00000425064 674 ntBASIC18.6■□□□□ 0.57
RC3H1Q5TC82 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RC3H1Q5TC82 ST13P19-201ENST00000442505 1124 ntBASIC18.6■□□□□ 0.57
RC3H1Q5TC82 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms