Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 MKNK2P1-201ENST00000437526 628 ntBASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 RPL13P2-201ENST00000440687 659 ntBASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 AC025048.3-201ENST00000590609 569 ntBASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 AC005702.4-201ENST00000618393 416 ntBASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 LINC00628-201ENST00000628516 1289 ntBASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00242Q5T6M2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC138969.2-201ENST00000532739 9932 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TOMM22P5-201ENST00000416399 439 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TPM4P1-201ENST00000436100 807 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SERBP1P3-201ENST00000459980 809 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SLC25A1P1-201ENST00000528351 927 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 KRT126P-201ENST00000549467 1181 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC040169.1-201ENST00000565382 521 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC022145.2-201ENST00000598203 171 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AGGF1P1-201ENST00000509500 2073 ntBASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00242Q5T6M2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms