Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AC104073.2-201ENST00000453737 312 ntBASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 BNIP3P13-201ENST00000599968 566 ntBASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AL034417.3-201ENST00000641100 1043 ntBASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 AC023090.2-201ENST00000625182 2110 ntBASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SPTLC1P5-201ENST00000450718 252 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 RNA5SP423-201ENST00000517127 109 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AC022217.1-201ENST00000521069 738 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 CHMP4BP1-201ENST00000556017 588 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 AL023803.2-201ENST00000620080 638 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 TUBBP5-203ENST00000508529 1334 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms