Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 AC009093.2-202ENST00000620513 2079 ntBASIC15.66■□□□□ 0.1
RAB6CQ53S08 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB6CQ53S08 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB6CQ53S08 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB6CQ53S08 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB6CQ53S08 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 AC011840.2-201ENST00000563063 1520 ntBASIC15.65■□□□□ 0.1
RAB6CQ53S08 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 FAM197Y7-201ENST00000432892 766 ntBASIC15.65■□□□□ 0.1
RAB6CQ53S08 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 AC015936.2-201ENST00000593177 259 ntBASIC15.65■□□□□ 0.1
RAB6CQ53S08 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ENPP7P14-201ENST00000621765 1040 ntBASIC15.65■□□□□ 0.1
RAB6CQ53S08 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB6CQ53S08 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AC113367.3-201ENST00000508316 1912 ntBASIC15.64■□□□□ 0.09
RAB6CQ53S08 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AC079776.1-201ENST00000401540 1152 ntBASIC15.64■□□□□ 0.09
RAB6CQ53S08 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AL355864.2-201ENST00000447420 863 ntBASIC15.64■□□□□ 0.09
RAB6CQ53S08 KRT17P7-201ENST00000451704 1104 ntBASIC15.64■□□□□ 0.09
RAB6CQ53S08 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.64■□□□□ 0.09
RAB6CQ53S08 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB6CQ53S08 SNX29P1-201ENST00000548357 1007 ntBASIC15.64■□□□□ 0.09
RAB6CQ53S08 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms