Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 LILRP1-201ENST00000444199 1370 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AC140658.5-201ENST00000438532 169 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AL139010.1-201ENST00000454878 894 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 UNC93B7-201ENST00000509439 705 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
ERCC6LQ2NKX8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 PRSS29P-201ENST00000440800 595 ntBASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC008735.5-201ENST00000623544 497 ntBASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms