Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.8□□□□□ -0.04
CDK3Q00526 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.8□□□□□ -0.04
CDK3Q00526 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.8□□□□□ -0.04
CDK3Q00526 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 MIR4683-201ENST00000579659 81 ntBASIC14.8□□□□□ -0.04
CDK3Q00526 MIR4525-201ENST00000580000 75 ntBASIC14.8□□□□□ -0.04
CDK3Q00526 AC005695.3-201ENST00000614522 232 ntBASIC14.8□□□□□ -0.04
CDK3Q00526 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 AC244157.2-201ENST00000616239 1006 ntBASIC14.8□□□□□ -0.04
CDK3Q00526 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.8□□□□□ -0.04
CDK3Q00526 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.8□□□□□ -0.04
CDK3Q00526 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CDK3Q00526 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDK3Q00526 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDK3Q00526 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDK3Q00526 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDK3Q00526 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDK3Q00526 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.79□□□□□ -0.04
CDK3Q00526 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.79□□□□□ -0.04
CDK3Q00526 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.79□□□□□ -0.04
CDK3Q00526 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 HSPB1P2-201ENST00000448722 546 ntBASIC14.79□□□□□ -0.04
CDK3Q00526 AL591846.1-201ENST00000451736 433 ntBASIC14.79□□□□□ -0.04
CDK3Q00526 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.79□□□□□ -0.04
CDK3Q00526 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.79□□□□□ -0.04
CDK3Q00526 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.79□□□□□ -0.04
CDK3Q00526 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDK3Q00526 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 AP001002.3-201ENST00000623482 206 ntBASIC14.79□□□□□ -0.04
CDK3Q00526 AC002472.3-201ENST00000640124 621 ntBASIC14.79□□□□□ -0.04
CDK3Q00526 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDK3Q00526 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDK3Q00526 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms