Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX3P78415 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 PAUPAR-201ENST00000630360 2965 ntBASIC17.63■□□□□ 0.41
IRX3P78415 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.63■□□□□ 0.41
IRX3P78415 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.63■□□□□ 0.41
IRX3P78415 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 MIR3619-201ENST00000579667 83 ntBASIC17.63■□□□□ 0.41
IRX3P78415 AC016629.1-201ENST00000596579 586 ntBASIC17.63■□□□□ 0.41
IRX3P78415 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 AP001002.3-201ENST00000623482 206 ntBASIC17.63■□□□□ 0.41
IRX3P78415 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 AL645728.2-202ENST00000641679 227 ntBASIC17.63■□□□□ 0.41
IRX3P78415 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 AC127383.1-201ENST00000444697 1800 ntBASIC17.63■□□□□ 0.41
IRX3P78415 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
IRX3P78415 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX3P78415 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX3P78415 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IRX3P78415 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 CYP46A4P-201ENST00000414953 267 ntBASIC17.62■□□□□ 0.41
IRX3P78415 AC016700.1-201ENST00000429424 312 ntBASIC17.62■□□□□ 0.41
IRX3P78415 HIST2H2BB-201ENST00000449108 381 ntBASIC17.62■□□□□ 0.41
IRX3P78415 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX3P78415 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.62■□□□□ 0.41
IRX3P78415 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX3P78415 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.62■□□□□ 0.41
IRX3P78415 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX3P78415 AL603764.1-201ENST00000636452 321 ntBASIC17.62■□□□□ 0.41
IRX3P78415 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
IRX3P78415 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IRX3P78415 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX3P78415 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
IRX3P78415 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
IRX3P78415 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.61■□□□□ 0.41
IRX3P78415 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.61■□□□□ 0.41
IRX3P78415 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 AC106820.3-201ENST00000561653 397 ntBASIC17.61■□□□□ 0.41
IRX3P78415 AC005730.2-201ENST00000564549 1184 ntBASIC17.61■□□□□ 0.41
IRX3P78415 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms