Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.73□□□□□ -0.05
YBX1P67809 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
YBX1P67809 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
YBX1P67809 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YBX1P67809 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 KLF2P2-201ENST00000416807 1039 ntBASIC14.72□□□□□ -0.05
YBX1P67809 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.72□□□□□ -0.05
YBX1P67809 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.72□□□□□ -0.05
YBX1P67809 AC011495.1-201ENST00000498085 584 ntBASIC14.72□□□□□ -0.05
YBX1P67809 USP32P1-208ENST00000506594 1164 ntBASIC14.72□□□□□ -0.05
YBX1P67809 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
YBX1P67809 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
YBX1P67809 AP001063.1-201ENST00000568332 529 ntBASIC14.72□□□□□ -0.05
YBX1P67809 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 PRSS30P-206ENST00000641773 873 ntBASIC14.72□□□□□ -0.05
YBX1P67809 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.72□□□□□ -0.05
YBX1P67809 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.72□□□□□ -0.05
YBX1P67809 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
YBX1P67809 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YBX1P67809 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 AC012508.2-201ENST00000567613 1472 ntBASIC14.71□□□□□ -0.05
YBX1P67809 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.71□□□□□ -0.05
YBX1P67809 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
YBX1P67809 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
YBX1P67809 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 AC007389.4-201ENST00000454674 793 ntBASIC14.71□□□□□ -0.05
YBX1P67809 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
YBX1P67809 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 AC106760.1-201ENST00000508690 800 ntBASIC14.71□□□□□ -0.05
YBX1P67809 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.71□□□□□ -0.05
YBX1P67809 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.71□□□□□ -0.05
YBX1P67809 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.71□□□□□ -0.05
YBX1P67809 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
YBX1P67809 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
YBX1P67809 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms