Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.34□□□□□ -0.27
SEC61A1P61619 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC004790.1-201ENST00000612686 536 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 AC009118.2-201ENST00000613275 655 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.33□□□□□ -0.27
SEC61A1P61619 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
SEC61A1P61619 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC61A1P61619 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC61A1P61619 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SEC61A1P61619 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC61A1P61619 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SEC61A1P61619 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.33□□□□□ -0.28
SEC61A1P61619 SPTLC1P1-201ENST00000447199 261 ntBASIC13.33□□□□□ -0.28
SEC61A1P61619 SERBP1P3-201ENST00000459980 809 ntBASIC13.33□□□□□ -0.28
SEC61A1P61619 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SEC61A1P61619 AC104794.3-201ENST00000566840 1248 ntBASIC13.33□□□□□ -0.28
SEC61A1P61619 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.33□□□□□ -0.28
SEC61A1P61619 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.33□□□□□ -0.28
SEC61A1P61619 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SEC61A1P61619 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC61A1P61619 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61A1P61619 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC61A1P61619 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 AL691432.1-201ENST00000596308 1422 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms