Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.7■□□□□ 0.74
RIPK4P57078 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.7■□□□□ 0.74
RIPK4P57078 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.7■□□□□ 0.74
RIPK4P57078 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.7■□□□□ 0.74
RIPK4P57078 KRT8P4-201ENST00000509735 1454 ntBASIC19.7■□□□□ 0.74
RIPK4P57078 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RIPK4P57078 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK4P57078 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.7■□□□□ 0.74
RIPK4P57078 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK4P57078 TSPY26P-202ENST00000565928 3884 ntBASIC19.7■□□□□ 0.74
RIPK4P57078 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK4P57078 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RIPK4P57078 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 RN7SKP175-201ENST00000408472 289 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.69■□□□□ 0.74
RIPK4P57078 AC004945.1-201ENST00000416738 983 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK4P57078 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK4P57078 HOMER2P2-201ENST00000451621 847 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 RPL13AP20-201ENST00000459725 609 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK4P57078 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK4P57078 MIR4683-201ENST00000579659 81 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 PPY2P-201ENST00000582808 702 ntBASIC19.69■□□□□ 0.74
RIPK4P57078 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.69■□□□□ 0.74
RIPK4P57078 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK4P57078 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK4P57078 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK4P57078 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RIPK4P57078 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK4P57078 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
RIPK4P57078 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RIPK4P57078 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 SALL4P5-201ENST00000419001 1760 ntBASIC19.68■□□□□ 0.74
RIPK4P57078 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 AC007969.1-201ENST00000433675 447 ntBASIC19.68■□□□□ 0.74
RIPK4P57078 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.68■□□□□ 0.74
RIPK4P57078 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.68■□□□□ 0.74
RIPK4P57078 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RIPK4P57078 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RIPK4P57078 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RIPK4P57078 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 AC006058.4-201ENST00000624016 1670 ntBASIC19.68■□□□□ 0.74
RIPK4P57078 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK4P57078 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK4P57078 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.68■□□□□ 0.74
RIPK4P57078 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK4P57078 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK4P57078 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RIPK4P57078 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK4P57078 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK4P57078 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms