Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 AL161772.1-201ENST00000610494 4412 ntBASIC13.92□□□□□ -0.18
CLDN20P56880 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 TMEM14DP-201ENST00000422205 345 ntBASIC13.91□□□□□ -0.18
CLDN20P56880 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDN20P56880 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN20P56880 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN20P56880 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN20P56880 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CLDN20P56880 PCDHA3-202ENST00000532566 4594 ntBASIC13.91□□□□□ -0.18
CLDN20P56880 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN20P56880 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CLDN20P56880 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 AC140479.7-201ENST00000636301 2332 ntBASIC13.9□□□□□ -0.18
CLDN20P56880 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN20P56880 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.9□□□□□ -0.18
CLDN20P56880 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN20P56880 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 ENPP7P5-201ENST00000541031 1031 ntBASIC13.9□□□□□ -0.18
CLDN20P56880 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 AC093813.1-201ENST00000605066 256 ntBASIC13.9□□□□□ -0.18
CLDN20P56880 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms