Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CMC4P56277 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CMC4P56277 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CMC4P56277 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CMC4P56277 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 REXO1L5P-201ENST00000622260 2098 ntBASIC11.24□□□□□ -0.61
CMC4P56277 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.24□□□□□ -0.61
CMC4P56277 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CMC4P56277 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 CNN2P8-201ENST00000421872 913 ntBASIC11.24□□□□□ -0.61
CMC4P56277 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 FAM8A4P-201ENST00000435433 1213 ntBASIC11.24□□□□□ -0.61
CMC4P56277 ACA64.2-201ENST00000459014 129 ntBASIC11.24□□□□□ -0.61
CMC4P56277 FTH1P14-201ENST00000482930 551 ntBASIC11.24□□□□□ -0.61
CMC4P56277 MESTP3-201ENST00000503460 968 ntBASIC11.24□□□□□ -0.61
CMC4P56277 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.24□□□□□ -0.61
CMC4P56277 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.24□□□□□ -0.61
CMC4P56277 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.24□□□□□ -0.61
CMC4P56277 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.24□□□□□ -0.61
CMC4P56277 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.24□□□□□ -0.61
CMC4P56277 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 AC006453.4-201ENST00000636949 1252 ntBASIC11.24□□□□□ -0.61
CMC4P56277 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.24□□□□□ -0.61
CMC4P56277 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.24□□□□□ -0.61
CMC4P56277 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CMC4P56277 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.24□□□□□ -0.61
CMC4P56277 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.24□□□□□ -0.61
CMC4P56277 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 AL137783.1-201ENST00000623494 1896 ntBASIC11.23□□□□□ -0.61
CMC4P56277 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 AP000845.1-201ENST00000581677 2131 ntBASIC11.23□□□□□ -0.61
CMC4P56277 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CMC4P56277 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CMC4P56277 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CMC4P56277 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 EIF3FP3-201ENST00000434851 1086 ntBASIC11.23□□□□□ -0.61
CMC4P56277 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.23□□□□□ -0.61
CMC4P56277 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.23□□□□□ -0.61
CMC4P56277 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms